R High Performance Programming

R High Performance Programming PDF Author: Aloysius Lim
Publisher: Packt Publishing Ltd
ISBN: 1783989270
Category : Computers
Languages : en
Pages : 176

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Book Description
This book is for programmers and developers who want to improve the performance of their R programs by making them run faster with large data sets or who are trying to solve a pesky performance problem.

R High Performance Programming

R High Performance Programming PDF Author: Aloysius Lim
Publisher: Packt Publishing Ltd
ISBN: 1783989270
Category : Computers
Languages : en
Pages : 176

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Book Description
This book is for programmers and developers who want to improve the performance of their R programs by making them run faster with large data sets or who are trying to solve a pesky performance problem.

Mastering Parallel Programming with R

Mastering Parallel Programming with R PDF Author: Simon R. Chapple
Publisher: Packt Publishing Ltd
ISBN: 1784394629
Category : Computers
Languages : en
Pages : 244

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Book Description
Master the robust features of R parallel programming to accelerate your data science computations About This Book Create R programs that exploit the computational capability of your cloud platforms and computers to the fullest Become an expert in writing the most efficient and highest performance parallel algorithms in R Get to grips with the concept of parallelism to accelerate your existing R programs Who This Book Is For This book is for R programmers who want to step beyond its inherent single-threaded and restricted memory limitations and learn how to implement highly accelerated and scalable algorithms that are a necessity for the performant processing of Big Data. No previous knowledge of parallelism is required. This book also provides for the more advanced technical programmer seeking to go beyond high level parallel frameworks. What You Will Learn Create and structure efficient load-balanced parallel computation in R, using R's built-in parallel package Deploy and utilize cloud-based parallel infrastructure from R, including launching a distributed computation on Hadoop running on Amazon Web Services (AWS) Get accustomed to parallel efficiency, and apply simple techniques to benchmark, measure speed and target improvement in your own code Develop complex parallel processing algorithms with the standard Message Passing Interface (MPI) using RMPI, pbdMPI, and SPRINT packages Build and extend a parallel R package (SPRINT) with your own MPI-based routines Implement accelerated numerical functions in R utilizing the vector processing capability of your Graphics Processing Unit (GPU) with OpenCL Understand parallel programming pitfalls, such as deadlock and numerical instability, and the approaches to handle and avoid them Build a task farm master-worker, spatial grid, and hybrid parallel R programs In Detail R is one of the most popular programming languages used in data science. Applying R to big data and complex analytic tasks requires the harnessing of scalable compute resources. Mastering Parallel Programming with R presents a comprehensive and practical treatise on how to build highly scalable and efficient algorithms in R. It will teach you a variety of parallelization techniques, from simple use of R's built-in parallel package versions of lapply(), to high-level AWS cloud-based Hadoop and Apache Spark frameworks. It will also teach you low level scalable parallel programming using RMPI and pbdMPI for message passing, applicable to clusters and supercomputers, and how to exploit thousand-fold simple processor GPUs through ROpenCL. By the end of the book, you will understand the factors that influence parallel efficiency, including assessing code performance and implementing load balancing; pitfalls to avoid, including deadlock and numerical instability issues; how to structure your code and data for the most appropriate type of parallelism for your problem domain; and how to extract the maximum performance from your R code running on a variety of computer systems. Style and approach This book leads you chapter by chapter from the easy to more complex forms of parallelism. The author's insights are presented through clear practical examples applied to a range of different problems, with comprehensive reference information for each of the R packages employed. The book can be read from start to finish, or by dipping in chapter by chapter, as each chapter describes a specific parallel approach and technology, so can be read as a standalone.

Learning R Programming

Learning R Programming PDF Author: Kun Ren
Publisher: Packt Publishing Ltd
ISBN: 1785880624
Category : Computers
Languages : en
Pages : 576

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Book Description
Become an efficient data scientist with R About This Book Explore the R language from basic types and data structures to advanced topics Learn how to tackle programming problems and explore both functional and object-oriented programming techniques Learn how to address the core problems of programming in R and leverage the most popular packages for common tasks Who This Book Is For This is the perfect tutorial for anyone who is new to statistical programming and modeling. Anyone with basic programming and data processing skills can pick this book up to systematically learn the R programming language and crucial techniques. What You Will Learn Explore the basic functions in R and familiarize yourself with common data structures Work with data in R using basic functions of statistics, data mining, data visualization, root solving, and optimization Get acquainted with R's evaluation model with environments and meta-programming techniques with symbol, call, formula, and expression Get to grips with object-oriented programming in R: including the S3, S4, RC, and R6 systems Access relational databases such as SQLite and non-relational databases such as MongoDB and Redis Get to know high performance computing techniques such as parallel computing and Rcpp Use web scraping techniques to extract information Create RMarkdown, an interactive app with Shiny, DiagramR, interactive charts, ggvis, and more In Detail R is a high-level functional language and one of the must-know tools for data science and statistics. Powerful but complex, R can be challenging for beginners and those unfamiliar with its unique behaviors. Learning R Programming is the solution - an easy and practical way to learn R and develop a broad and consistent understanding of the language. Through hands-on examples you'll discover powerful R tools, and R best practices that will give you a deeper understanding of working with data. You'll get to grips with R's data structures and data processing techniques, as well as the most popular R packages to boost your productivity from the offset. Start with the basics of R, then dive deep into the programming techniques and paradigms to make your R code excel. Advance quickly to a deeper understanding of R's behavior as you learn common tasks including data analysis, databases, web scraping, high performance computing, and writing documents. By the end of the book, you'll be a confident R programmer adept at solving problems with the right techniques. Style and approach Developed to make learning easy and intuitive, this book comes packed with a wide variety of statistical and graphical techniques and a wealth of practical information for anyone looking to get started with this exciting and powerful language.

Parallel R

Parallel R PDF Author: Q. Ethan McCallum
Publisher: "O'Reilly Media, Inc."
ISBN: 1449320333
Category : Computers
Languages : en
Pages : 126

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Book Description
It’s tough to argue with R as a high-quality, cross-platform, open source statistical software product—unless you’re in the business of crunching Big Data. This concise book introduces you to several strategies for using R to analyze large datasets, including three chapters on using R and Hadoop together. You’ll learn the basics of Snow, Multicore, Parallel, Segue, RHIPE, and Hadoop Streaming, including how to find them, how to use them, when they work well, and when they don’t. With these packages, you can overcome R’s single-threaded nature by spreading work across multiple CPUs, or offloading work to multiple machines to address R’s memory barrier. Snow: works well in a traditional cluster environment Multicore: popular for multiprocessor and multicore computers Parallel: part of the upcoming R 2.14.0 release R+Hadoop: provides low-level access to a popular form of cluster computing RHIPE: uses Hadoop’s power with R’s language and interactive shell Segue: lets you use Elastic MapReduce as a backend for lapply-style operations

Intel Xeon Phi Coprocessor High Performance Programming

Intel Xeon Phi Coprocessor High Performance Programming PDF Author: James Jeffers
Publisher: Newnes
ISBN: 0124104940
Category : Computers
Languages : en
Pages : 432

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Book Description
Authors Jim Jeffers and James Reinders spent two years helping educate customers about the prototype and pre-production hardware before Intel introduced the first Intel Xeon Phi coprocessor. They have distilled their own experiences coupled with insights from many expert customers, Intel Field Engineers, Application Engineers and Technical Consulting Engineers, to create this authoritative first book on the essentials of programming for this new architecture and these new products. This book is useful even before you ever touch a system with an Intel Xeon Phi coprocessor. To ensure that your applications run at maximum efficiency, the authors emphasize key techniques for programming any modern parallel computing system whether based on Intel Xeon processors, Intel Xeon Phi coprocessors, or other high performance microprocessors. Applying these techniques will generally increase your program performance on any system, and better prepare you for Intel Xeon Phi coprocessors and the Intel MIC architecture. A practical guide to the essentials of the Intel Xeon Phi coprocessor Presents best practices for portable, high-performance computing and a familiar and proven threaded, scalar-vector programming model Includes simple but informative code examples that explain the unique aspects of this new highly parallel and high performance computational product Covers wide vectors, many cores, many threads and high bandwidth cache/memory architecture

Efficient R Programming

Efficient R Programming PDF Author: Colin Gillespie
Publisher: "O'Reilly Media, Inc."
ISBN: 1491950730
Category : Computers
Languages : en
Pages : 222

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Book Description
There are many excellent R resources for visualization, data science, and package development. Hundreds of scattered vignettes, web pages, and forums explain how to use R in particular domains. But little has been written on how to simply make R work effectively—until now. This hands-on book teaches novices and experienced R users how to write efficient R code. Drawing on years of experience teaching R courses, authors Colin Gillespie and Robin Lovelace provide practical advice on a range of topics—from optimizing the set-up of RStudio to leveraging C++—that make this book a useful addition to any R user’s bookshelf. Academics, business users, and programmers from a wide range of backgrounds stand to benefit from the guidance in Efficient R Programming. Get advice for setting up an R programming environment Explore general programming concepts and R coding techniques Understand the ingredients of an efficient R workflow Learn how to efficiently read and write data in R Dive into data carpentry—the vital skill for cleaning raw data Optimize your code with profiling, standard tricks, and other methods Determine your hardware capabilities for handling R computation Maximize the benefits of collaborative R programming Accelerate your transition from R hacker to R programmer

R Programming By Example

R Programming By Example PDF Author: Omar Trejo
Publisher: Packt Publishing Ltd
ISBN: 1788291360
Category : Computers
Languages : en
Pages : 461

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Book Description
This step-by-step guide demonstrates how to build simple-to-advanced applications through examples in R using modern tools. About This Book Get a firm hold on the fundamentals of R through practical hands-on examples Get started with good R programming fundamentals for data science Exploit the different libraries of R to build interesting applications in R Who This Book Is For This books is for aspiring data science professionals or statisticians who would like to learn about the R programming language in a practical manner. Basic programming knowledge is assumed. What You Will Learn Discover techniques to leverage R's features, and work with packages Perform a descriptive analysis and work with statistical models using R Work efficiently with objects without using loops Create diverse visualizations to gain better understanding of the data Understand ways to produce good visualizations and create reports for the results Read and write data from relational databases and REST APIs, both packaged and unpackaged Improve performance by writing better code, delegating that code to a more efficient programming language, or making it parallel In Detail R is a high-level statistical language and is widely used among statisticians and data miners to develop analytical applications. Often, data analysis people with great analytical skills lack solid programming knowledge and are unfamiliar with the correct ways to use R. Based on the version 3.4, this book will help you develop strong fundamentals when working with R by taking you through a series of full representative examples, giving you a holistic view of R. We begin with the basic installation and configuration of the R environment. As you progress through the exercises, you'll become thoroughly acquainted with R's features and its packages. With this book, you will learn about the basic concepts of R programming, work efficiently with graphs, create publication-ready and interactive 3D graphs, and gain a better understanding of the data at hand. The detailed step-by-step instructions will enable you to get a clean set of data, produce good visualizations, and create reports for the results. It also teaches you various methods to perform code profiling and performance enhancement with good programming practices, delegation, and parallelization. By the end of this book, you will know how to efficiently work with data, create quality visualizations and reports, and develop code that is modular, expressive, and maintainable. Style and Approach This is an easy-to-understand guide filled with real-world examples, giving you a holistic view of R and practical, hands-on experience.

Conquering Big Data with High Performance Computing

Conquering Big Data with High Performance Computing PDF Author: Ritu Arora
Publisher: Springer
ISBN: 3319337424
Category : Computers
Languages : en
Pages : 329

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Book Description
This book provides an overview of the resources and research projects that are bringing Big Data and High Performance Computing (HPC) on converging tracks. It demystifies Big Data and HPC for the reader by covering the primary resources, middleware, applications, and tools that enable the usage of HPC platforms for Big Data management and processing.Through interesting use-cases from traditional and non-traditional HPC domains, the book highlights the most critical challenges related to Big Data processing and management, and shows ways to mitigate them using HPC resources. Unlike most books on Big Data, it covers a variety of alternatives to Hadoop, and explains the differences between HPC platforms and Hadoop.Written by professionals and researchers in a range of departments and fields, this book is designed for anyone studying Big Data and its future directions. Those studying HPC will also find the content valuable.

High Performance Computing

High Performance Computing PDF Author: Michela Taufer
Publisher: Springer
ISBN: 331946079X
Category : Computers
Languages : en
Pages : 699

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Book Description
This book constitutes revised selected papers from 7 workshops that were held in conjunction with the ISC High Performance 2016 conference in Frankfurt, Germany, in June 2016. The 45 papers presented in this volume were carefully reviewed and selected for inclusion in this book. They stem from the following workshops: Workshop on Exascale Multi/Many Core Computing Systems, E-MuCoCoS; Second International Workshop on Communication Architectures at Extreme Scale, ExaComm; HPC I/O in the Data Center Workshop, HPC-IODC; International Workshop on OpenPOWER for HPC, IWOPH; Workshop on the Application Performance on Intel Xeon Phi – Being Prepared for KNL and Beyond, IXPUG; Workshop on Performance and Scalability of Storage Systems, WOPSSS; and International Workshop on Performance Portable Programming Models for Accelerators, P3MA.

High Performance Computing

High Performance Computing PDF Author: Michèle Weiland
Publisher: Springer
ISBN: 3030206564
Category : Computers
Languages : en
Pages : 352

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Book Description
This book constitutes the refereed proceedings of the 34th International Conference on High Performance Computing, ISC High Performance 2019, held in Frankfurt/Main, Germany, in June 2019. The 17 revised full papers presented were carefully reviewed and selected from 70 submissions. The papers cover a broad range of topics such as next-generation high performance components; exascale systems; extreme-scale applications; HPC and advanced environmental engineering projects; parallel ray tracing - visualization at its best; blockchain technology and cryptocurrency; parallel processing in life science; quantum computers/computing; what's new with cloud computing for HPC; parallel programming models for extreme-scale computing; workflow management; machine learning and big data analytics; and deep learning and HPC.